Kids First Data Resource Center

Repositories

• kf-dwh-import-vcf
  Scala 0 0 0 0 Updated Nov 26, 2020

• riff

  Forked from overture-stack/riff

  🚧 A Microservice for URL Shortening and sharing.
  Java AGPL-3.0 1 0 0 0 Updated Nov 25, 2020

• kf-portal-ui

  📊 The Kids First Data Resource Portal and Social Network User Interface

  react javascript ui portal
  JavaScript Apache-2.0 10 19 62 1 Updated Nov 25, 2020

• kf-portal-etl

  🏭 Extract-Transform-Load Pipeline for producing data for the Kids First Data Resource Portal
  Scala Apache-2.0 2 5 5 0 Updated Nov 24, 2020

• kf-api-study-creator

  📂 Powers investigator-driven data staging

  python graphql django graphene
  3 packages Python Apache-2.0 0 1 33 6 Updated Nov 24, 2020

• kf-ui-data-tracker

  👨‍⚕️ An application to collect study data and report on study status

  react ui apollo-client
  JavaScript Apache-2.0 1 1 31 2 Updated Nov 24, 2020

• rollcall

  Forked from overture-stack/rollcall

  A service for managing indices and aliases in an elasticsearch cluster
  Java AGPL-3.0 1 0 0 0 Updated Nov 24, 2020

• kf-api-release-coordinator

  🤹‍♀️ Coordinate multiple services to synchronize data releases

  python api graphql django rest graphene
  1 package Python Apache-2.0 1 2 17 (1 issue needs help) 1 Updated Nov 20, 2020

• kf-api-search-members

  This service provides an endpoint to query the member elasticsearch database. Results are returned based on a provided query string and some low / high limit for the number of results desired.
  Scala 0 0 0 0 Updated Nov 20, 2020

• kf-lib-data-ingest

  🏭 Kids First Data Ingest Library

  python docker etl graph data-wrangling ingest
  Python Apache-2.0 0 1 16 1 Updated Nov 20, 2020

• kf-utils-python

  🛠 Collection of reusable Python utilities related to the Kids First project

  python utility-library chi kids-first
  Python Apache-2.0 0 1 0 0 Updated Nov 19, 2020

• ego

  Forked from overture-stack/ego

  ✅ An OAuth 2.0 Authorization service that supports multiple OpenID Connect Identity Providers
  Java AGPL-3.0 4 1 0 0 Updated Nov 19, 2020

• kf-arranger

  🔎 Elasticsearch API Server for Kids First Portal
  JavaScript Apache-2.0 1 1 0 0 Updated Nov 17, 2020

• arranger

  Forked from overture-stack/arranger

  🚧 Data Portal Generation
  JavaScript AGPL-3.0 15 0 0 0 Updated Nov 17, 2020

• kf-api-fhir-service

  🔥 FHIR Data Service for Kids First

  java docker fhir-api smile-cdr
  Shell Apache-2.0 2 1 11 1 Updated Nov 17, 2020

• kf-alignment-workflow

  🔬 Alignment workflow for Kids-First DRC

  bioinformatics cwl drc-harmonization
  Common Workflow Language Apache-2.0 7 5 3 0 Updated Nov 13, 2020

• kf-public-stats-api
  TypeScript Apache-2.0 0 0 1 4 Updated Nov 13, 2020

• kf-somatic-workflow

  🔬 Somatic workflow for Kids-First

  bioinformatics cwl drc-harmonization
  Common Workflow Language 2 5 1 0 Updated Nov 12, 2020

• kf-model-fhir

  🔥 FHIR Data Model for Kids First

  python docker data model fhir
  Python Apache-2.0 1 1 20 (1 issue needs help) 4 Updated Nov 9, 2020

• kf-rnaseq-workflow

  🔬 RNA-Seq workflow for Kids-First DRC

  bioinformatics cwl drc-harmonization
  Common Workflow Language Apache-2.0 4 0 1 0 Updated Nov 2, 2020

• kf-jointgenotyping-workflow

  🔬 Joint genotyping workflow for Kids-First DRC

  bioinformatics cwl drc-harmonization
  Common Workflow Language Apache-2.0 1 2 0 0 Updated Nov 2, 2020

• kf-task-release-reports

  📈 Generate data reports per release
  Python Apache-2.0 0 0 3 2 Updated Oct 27, 2020

• kf-api-dataservice

  🗄️ Primary API for interacting with the Kids First data

  python api flask rest
  1 package Python Apache-2.0 1 3 69 (12 issues need help) 5 Updated Oct 27, 2020

• kf-arranger-admin

  arranger admin api for the Kids First project
  JavaScript Apache-2.0 0 0 0 3 Updated Oct 19, 2020

• kf-cavatica-public-app-publisher

  This repo houses scripts and guidelines on publishing a CWL app as a public app on Cavtica
  Python Apache-2.0 0 0 0 0 Updated Oct 15, 2020

• kf-ui-release-coordinator

  📆 Interface to the Release Coordinator

  react dashboard
  JavaScript Apache-2.0 0 1 4 0 Updated Oct 8, 2020

• kf-lambda-healthchecker

  🏥 Check the health of various services

  python devops monitoring aws-lambda
  Python Apache-2.0 0 1 0 0 Updated Oct 6, 2020

• kf-portal-etl-task-service

  Forked from overture-stack/microservice-template-java

  ✅ A template for a microservice written in Java and a resource server under Ego with JWT authorization
  Java AGPL-3.0 57 1 0 0 Updated Oct 1, 2020

• kf-api-portal-reports

  📝 Generate reports based on queries built using the Kids First Portal
  JavaScript Apache-2.0 0 0 0 0 Updated Sep 29, 2020

• kf-lambda-member-update

  This lambda consume events from sqs and update elasticsearch member index

  lambda
  Python 0 0 0 0 Updated Sep 26, 2020