Intervene: a tool for intersection and visualization of multiple genomic region and gene sets

VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.

G-BLASTN is a GPU-accelerated nucleotide alignment tool based on the widely used NCBI-BLAST.

Find and visualize rearrangements in DNA sequences

A python wrapper for the benchling api

Sequence alignment tools

memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping

👾 Generate identicons for DNA sequences with Python

A python package and a set of shell commands to handle GTF files

This bartender version could handle arbitrary length of barcode

strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.

Binomica Public Repository for Biological Parts

🍶Genome assembly with short sequence reads

Read DNA sequences from colourful Microsoft Word documents

A suite of unique bioinformatics tools for the brave explorer.

A tool to find and visualize rearrangements in DNA sequences

genomic alignment similarity search tool

🌲 VoSeq is a database to store voucher and sequence data

Evolutionary Bioinformatics Toolkit (EBT)

Fake genomes, fake sequencing, real insights.

R package for identifying motif matches and motif enrichment in DNA sequences

Interactive web app to compute and display statistics for genomes or DNA sequences of different organisms

Bioinformatic approach to prioritize transcription factors based on genetic variation

A tool for compression and analysis of DNA sequences

BMI/CS 576 (Fall 2019): Introduction To Bioinformatics @ UW-Madison

Convert the DNA sequence that codes for a protein in one species to the appropriate sequence that will work in a different species, while optimizing transcription.

Algorithms for Bionformatics - Python Module to handle biological sequences and run common algorithms and techniques

Python scripting library for generating designs readable by scadnano.

Script for removing or counting invariant sites for the RAxML ascertainment bias corrections