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Popular repositories

  1. AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available …

    Python 79 29

  2. Uses SAMTools, Python 2.7 and PySam to extract either junctions or exon read counts for known and novel junctions and exons. Requires an indexed BAM file with genomic coordinates

    Python 3 2

  3. Forked from seandavi/awesome-single-cell

    List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

    2 2

  4. Sample Classification and Model Evaluation in LineageProfiler

    Python

  5. Forked from scRNA-tools/scRNA-tools

    Table of software for the analysis of single-cell RNA-seq data.

    R

  6. Forked from kpeaton/kallisto-splice

    Modification of kallisto 0.43.1 for identifying splice junctions

    C

8 contributions in the last year

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Contribution activity

December 2022

Created 2 commits in 1 repository

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