satijalab / seurat
R toolkit for single cell genomics
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R toolkit for single cell genomics
R for data science: a book
R toolkit for the analysis of single-cell chromatin data
Inferring CNV from Single-Cell RNA-Seq
Presentation-Ready Data Summary and Analytic Result Tables
R package for community ecologists: popular ordination methods, ecological null models & diversity analysis
Survival Analysis and Visualization
RStan, the R interface to Stan
Easily generate information-rich, publication-quality tables from R
Accurate sample inference from amplicon data with single nucleotide resolution
R package for detecting doublets in single-cell RNA sequencing data
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
Simple Features for R
renv: Project environments for R.
An implementation of the Language Server Protocol for R
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
R Interface to Keras
Make Complex Heatmaps
brms R package for Bayesian generalized multivariate non-linear multilevel models using Stan
A lightweight, cross-platform, portable, and easy-to-maintain LaTeX distribution based on TeX Live