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File:Computational design and evaluation of DNA circuits to achieve optimal performance.svg




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File:Computational design and evaluation of DNA circuits to achieve optimal performance.svg
Size of this PNG preview of this SVG file: 512 × 484 pixels. Other resolutions: 254 × 240 pixels | 508 × 480 pixels | 812 × 768 pixels | 1,083 × 1,024 pixels | 2,167 × 2,048 pixels.

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Description
English: Synthetic biology tools are used to establish combinatorial optimization methods. The generated library is profiled using barcoding tools and biosensors allow to screen top producers within the library (gray area). Nature is a vital source of identified nutrients and pharmaceuticals. Metabolic engineering applies synthetic biology tools to produce compounds of the characterized biosynthetic pathway in a desired host (blue area). The production of certain compounds can be optimized using combinatorial optimization strategies. The data obtained from combinatorial library and its pre-characterized modules are computationally integrated to establish mathematical models to support the early design steps for chosen host on the basis of genome-scale metabolic modelling. The computational data suggest which synthetic pathways are the most promising in a given target organism and which host pathway genes need to be upregulated or be silenced based on knowledge of how different cellular subsystems work together. The best producers in combinatorial libraries can provide detailed information to feed into models that aim to uncover principles of how synthetic circuits behave in host systems. Blue arrows, regulators. Orange squares, CDSs. Brown “T”, terminators.[1]
Date
Source https://doi.org/10.1038/s41467-020-16175-y
Author Gita Naseri & Mattheos A. G. Koffas

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© The copyright holder of this file allows anyone to use it for any purpose, provided that the copyright holder is properly attributed. Redistribution, derivative work, commercial use, and all other use is permitted.

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Computational design and evaluation of DNA circuits to achieve optimal performance

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15 May 2020

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cf58b6c0c148c57e65c453638bbcd0f2187a516b

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Date/TimeThumbnailDimensionsUserComment
current22:02, 17 May 2020Thumbnail for version as of 22:02, 17 May 2020512 × 484 (471 KB)Rob HurtUploaded a work by Gita Naseri & Mattheos A. G. Koffas from https://doi.org/10.1038/s41467-020-16175-y with UploadWizard



The following pages on the English Wikipedia use this file (pages on other projects are not listed):

Metabolic engineering

Synthetic biological circuit

User:Adriana.rodriguez2002/Computational mathematics


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The following other wikis use this file:

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Μεταβολική μηχανική


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Ingeniaritza metaboliko

Lankide:Gorkaal/Proba orria


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Usage on nl.wikipedia.org

Synthetisch biologische schakeling



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