The Wayback Machine - http://web.archive.org/web/20201217220938/https://github.com/topics/sequence-analysis
Skip to content
#

sequence-analysis

Star

Here are 83 public repositories matching this topic...

Language: All
Filter by language
All 83 Python 24 Jupyter Notebook 11 C 9 Java 8 C++ 7 R 5 Perl 4 HTML 3 JavaScript 3 Julia 2
Sort: Best match
Sort options
Best match Most stars Fewest stars Most forks Fewest forks Recently updated Least recently updated

seqan / seqan3

Star
Open

Argument parser wrong copyright year and missing metadata

2
eseiler
eseiler commented Sep 16, 2020

Code:

#include <seqan3/argument_parser/all.hpp>

int main(int argc, char ** argv)
{
    seqan3::argument_parser parser{"App", argc, argv, seqan3::update_notifications::off};

    parser.info.author = "Foo Bar";
    parser.info.email = "foobar@example.com";
    parser.info.short_copyright = "BSD 3-Clause License";

    try
    {
        parser.parse();
    }
    catch (seqan3
Read more
bug good first issue

CSBiology / BioFSharp

Star
Open

Add pretty printers for common biological file formats

1
kMutagene
kMutagene commented Dec 1, 2018

As analyzing biological data with BioFSharp involves a lot of scripting, optional pretty printers help a lot when looking at results directly in the fsi window. This should be especially easy to add for parsing libraries that can already write the correct file format. A basic pretty printer for biocollections is already impelemented.
Here are some formats from the top of my head, feel free to add

Read more
good first issue project-all up-for-grabs

vitaliy-ostapchuk93 / disease-pattern-miner

Star

Disease Pattern Miner is a free, open-source mining framework for interactively discovering sequential disease patterns in medical health record datasets.

data-science machine-learning data-mining research big-data data-visualization datascience webapp data-analysis research-tool pattern-recognition datamining healthcare-application icd-9 medical-informatics sequence-analysis icd sequence-mining disease-prediction
  • Updated Mar 21, 2019
  • Java

Improve this page

Add a description, image, and links to the sequence-analysis topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the sequence-analysis topic, visit your repo's landing page and select "manage topics."

Learn more

You can’t perform that action at this time.