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1 History  





2 Members  





3 Phylogeny  





4 Taxonomy  





5 Notes  





6 References  





7 External links  














Armatimonadota






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Armatimonadota

Scientific classification Edit this classification

Domain:

Bacteria

Clade:

Terrabacteria

Phylum:

Armatimonadota
Tamaki et al. 2021[1]

Class

  • Armatimonadia
  • Chthonomonadetes
  • Synonyms

    • Candidate division OP10
  • "Armatimonadetes" Tamaki et al. 2011
  • "Armatimonadaeota" Oren et al. 2015
  • "Armatimonadota" Whitman et al. 2018
  • Armatimonadota is a phylumofgram-negative bacteria.

    History[edit]

    Armatimonadota was originally described solely on the basis of environmental 16S rRNA gene clone sequences, and was temporarily titled candidate phylum OP10. However, in 2011 a bacterial strain belonging to the phylum was isolated from an aquatic plant in Japan. The species was named Armatimonas rosea and was the first member of its phylum, genus, and species.[2]

    Members[edit]

    Armatimonas rosea, an aerobic chemoheterotrophic bacterium, strain YO-36T, was isolated from rhizoplane of an aquatic plant (a reed, Phragmites australis) inhabiting a freshwater lake in Japan.[2]

    Chthonomonas calidirosea, an aerobic, saccharolytic, obligately thermophilic, motile, non-spore-forming bacterium, strain T49(T), was isolated from geothermally heated soil at Hell's Gate, Tikitere, New Zealand.[3]

    Phylogeny[edit]

    16S rRNA based LTP_12_2021[4][5][6]

    GTDB 08-RS214 by Genome Taxonomy Database[7][8][9]

    Armatimonadota

    "Chthonomonadia"

    Chthonomonas calidirosea

    Fimbriimonadia

    Fimbriimonas ginsengisoli

    Armatimonadia

    Capsulimonas corticalis

    HRBIN17

    HRBIN17

    HRBIN17

    "Ca. Fervidibacter sacchari"

    UBA5829

    UBA5829

    UBA5829

    "Ca. Hippobium faecium"

    Fimbriimonadia

    Fimbriimonadales

    Chthonomonadia

    Chthonomonadales

    Chthonomonadaceae

    Chthonomonas calidirosea

    Armatimonadia

    Armatimonadales

    Armatimonadaceae

    Armatimonas rosea

    Capsulimonadaceae

    Capsulimonas corticalis

    Taxonomy[edit]

    The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[10] and National Center for Biotechnology Information (NCBI).[11]

    Notes[edit]

    References[edit]

    1. ^ Oren A, Garrity GM (2021). "Valid publication of the names of forty-two phyla of prokaryotes". Int J Syst Evol Microbiol. 71 (10): 5056. doi:10.1099/ijsem.0.005056. PMID 34694987.
  • ^ a b Tamaki, Hideyuki; Tanaka, Yasuhiro; Matsuzawa, Hiroaki; Muramatsu, Mizuho; Meng, Xian-Ying; Hanada, Satoshi; Mori, Kazuhiro; Kamagata, Yoichi (2010). "Armatimonas rosea gen. nov., sp. nov., a Gram-negative, aerobic, chemoheterotrophic bacterium of a novel bacterial phylum, Armatimonadetes phyl. nov., formally called the candidate phylum OP10". International Journal of Systematic and Evolutionary Microbiology. 61 (Pt 6): 1442–7. doi:10.1099/ijs.0.025643-0. PMID 20622056.
  • ^ Lee, Kevin C. Y.; Dunfield, Peter F.; Morgan, Xochitl C.; Crowe, Michelle A.; Houghton, Karen M.; Vyssotski, Mikhail; Ryan, Jason L. J.; Lagutin, Kirill; et al. (2010). "Chthonomonas calidirosea gen. nov., sp. nov., an aerobic, pigmented, thermophilic microorganism of a novel bacterial class, Chthonomonadetes classis. nov., of the newly described phylum Armatimonadetes originally designated candidate division OP10". International Journal of Systematic and Evolutionary Microbiology. 61 (Pt 10): 2482–90. doi:10.1099/ijs.0.027235-0. PMID 21097641.
  • ^ "The LTP". Retrieved 23 February 2021.
  • ^ "LTP_all tree in newick format". Retrieved 23 February 2021.
  • ^ "LTP_12_2021 Release Notes" (PDF). Retrieved 23 February 2021.
  • ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
  • ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
  • ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
  • ^ J.P. Euzéby. "Armatimonadetes". List of Prokaryotic names with Standing in Nomenclature (LPSN). Archived from the original on 2011-06-13. Retrieved 2016-03-20.
  • ^ Sayers; et al. "Armatimonadetes". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2016-03-20.
  • External links[edit]

    Prokaryotes: Bacteria classification
    Archaea
    Bacteria
    Eukaryota
    (major groups
    Excavata
    Diaphoretickes
    Hacrobia
    Cryptista
    Rhizaria
    Alveolata
    Stramenopiles
    Plants
    Amorphea
    Amoebozoa
    Opisthokonta
    Animals
    Fungi)

    Terrabacteria
    BV1, BV3, BV5

    others

  • Actinomycetia
  • "Aquicultoria"
  • Coriobacteriia
  • "Geothermincolia"
  • "Humimicrobiia"
  • Rubrobacteria
  • Thermoleophilia
  • "Bipolaricaulota"
    • "Bipolaricaulia"
  • Chloroflexota
  • Deinococcota
  • "Dormiibacterota"
    • "Dormibacteria"
  • Armatimonadota
    • "Abditibacteriia"
    • Armatimonadia
    • Chthonomonadia
    • Fimbriimonadia
    • "Heboniibacteriia"
    • "Zipacnadia"
  • "Eremiobacterota"
  • "Eudoremicrobiia"
    • "Xenobiia"
    • "Eremiobacteria"
  • Cyanoprokaryota

  • "Sericytochromatia"
  • "Vampirovibrionophyceae"
  • "Margulisiibacteriota"
    • "Marinamargulisbacteria"
    • "Riflemargulisbacteria"
    • "Saganbacteria"
    • "Termititenacia"
  • Firmicutes
    BV3
    Low GC

  • Bacillota A
    • "Clostridiia"
    • "Thermoanaerobacteria"
    • "Thermosediminibacteria"
  • Bacillota D
  • Bacillota E
    • "Sulfobacillia"
    • "Symbiobacteriia"
    • "Thermaerobacteria"
  • Bacillota G
    • "Hydrogenisporia"
    • Limnochordia
  • "Desulfotomaculota"
    • "Carboxydocellia"
    • "Carboxydothermia"
    • "Dehalobacteriia"
    • "Desulfitobacteriia"
    • "Desulfotomaculia"
    • "Moorellia"
    • "Peptococcia"
    • "Syntrophomonadia"
    • "Thermincolia"
  • "Halanaerobiaeota"
  • "Selenobacteria"
  • CPR group

  • "Patescibacteria"
  • Thermotogida

    Synergistetes

  • Synergistota
    • Synergistia
  • Thermocalda

  • Coprothermobacterota
  • Dictyoglomerota
    • Dictyoglomeria
  • "Lithacetigenota"
    • "Lithacetigenia"
  • "Thermodesulfobiota"
    • "Thermodesulfobiia"
  • Thermotogota
    • "Thermotogia"
  • Fusobacterida

  • "Macinerneyibacteriota"
    • "Macinerneyibacteriia"
  • "Muiribacteriota"
    • "Muiribacteriia"
  • "Rifleibacteriota"
    • "Ozemibacteria"
  • "Walliibacteriota"
  • Hydrobacteria
    BV2, BV4

    Clade 1

  • "Auribacterota"
    • "Ancaeobacteria"
    • "Auribacteria"
    • "Erginobacteria"
    • "Tritonobacteria"
  • "Desantisiibacteriota"
  • Elusimicrobiota
    • Elusimicrobiia
    • Endomicrobiia
  • "Firestoneibacteriota"
  • "Goldiibacteriota"
  • "Omnitrophota"
    • "Omnitrophia"
    • "Velamenicoccia"
  • "Ratteibacteriota"
  • Clade 2

  • "Hinthialibacterota"
    • "Hinthialibacteria"
  • "Hydrogenedentota"
    • "Hydrogenedentia"
  • "Poribacteriota"
  • "Saltatorellota"
    • "Saltatorellae"
  • "Sumerlaeota"
    • "Sumerlaeia"
  • Spirochaeto
    bacteriobiontes

  • "Lindowiibacteriota"
  • Spirochaetota
    • "Brevinematia"
    • "Brachyspirae"
    • "Exilispiria"
    • "Leptospiria"
    • "Spirochaetia"
  • PVC group
    (Planctobacteria)

  • Planctomycetota
  • Verrucomicrobiota
  • FCB group
    (Sphingobacteria)

  • Chlorobiia
  • "Ignavibacteriia"
  • "Kapabacteria"
  • "Kryptoniia"
  • Rhodothermia
  • Calditrichota
    • Calditrichia
  • "Cloacimonadota"
    • "Cloacimonadia"
  • "Coatesiibacteriota"
  • "Cosmopoliota"
    • "Cosmopolitia"
  • "Delongiibacteriota"
  • "Edwardsiibacteriota"
  • "Eiseniibacteriota"
  • "Electryoneota"
    • "Electryoneia"
    • "Tariuqbacteria"
  • "Fermentibacterota"
    • "Fermentibacteria"
  • Fibrobacterota
  • Gemmatimonadota
    • Gemmatimonadia
    • "Glassbacteria"
  • "Heilongiota"
    • "Heilongiia"
  • "Hydrothermota"
    • "Hydrothermia"
    • "Stahlbacteria"
  • "Krumholzibacteriota"
    • "Krumholzibacteriia"
  • "Latescibacterota"
    • "Handelsmanbacteria"
    • "Latescibacteria"
  • "Neomarinimicrobiota"
  • "Marinisomatota"
    • "Marinisomatia"
  • "Tianyaibacteriota"
  • "Zixiibacteriota"
  • Proteobacteria
    BV2

    Aquificida

  • Aquificota
    • Aquificia
    • "Desulfurobacteriia"
  • Campylobacterota
    • "Campylobacteria"
    • Desulfurellia
  • "Calescibacteriota"
    • "Calescibacteriia"
  • Chrysiogenota
    • Chrysiogenia
  • "Dadaibacteriota"
    • "Dadabacteria"
  • Deferribacterota
    • "Deferribacteria"
  • Desulfobacterota G
  • "Thermosulfidibacterota"
    • "Thermosulfidibacteria"
  • Deltaproteobacteria

  • Bdellovibrionia
  • Oligoflexia
  • "Binatota"
    • "Binatia"
  • "Deferrimicrobiota"
    • "Anaeroferrophilia"
    • "Deferrimicrobiia"
  • "Deferrisomatota"
  • "Desulfuromonadota"
    • Desulfuromonadia
  • "Lernaellota"
    • "Lernaellia"
  • "Methylomirabilota"
    • "Methylomirabilia"
  • "Moduliflexota"
    • "Moduliflexia"
  • Myxococcota
  • Nitrospinota
    • Nitrospinia
  • Nitrospirota
    • Nitrospiria
    • "Thermodesulfovibrionia"
  • SAR324
    • "Lambdaproteobacteria"
  • "Schekmaniibacteriota"
  • "Tectimicrobiota"
    • "Entotheonellia"
  • "Thermodesulfobacteriota"
  • others

  • "Aminicenantia"
  • Blastocatellia
  • "Fischerbacteria"
  • "Guanabaribacteriia"
  • "Holophagia"
  • "Polarisedimenticolia"
  • Thermoanaerobaculia
  • Vicinamibacteria
  • "Canglongiota"
    • "Canglongiia"
  • "Leptospirillaeota"
    • "Leptospirillia"
  • Pseudomonadota
  • others

  • "Salinosulfoleibacteria"
  • "Teskebacteria"
  • Alternative views: Wikispecies
  • Armatimonadota

  • GBIF: 10894271
  • LPSN: armatimonadota
  • NCBI: 67819
  • Armatimonadetes

  • Wikispecies: Armatimonadetes
  • EoL: 11766547
  • GBIF: 7553103
  • IRMNG: 11907892
  • ITIS: 956101
  • LPSN: armatimonadetes
  • NZOR: a8e1e533-f784-43e6-a7ab-110000dca60d
  • Open Tree of Life: 520571
  • Paleobiology Database: 325148

  • Retrieved from "https://en.wikipedia.org/w/index.php?title=Armatimonadota&oldid=1209770815"

    Category: 
    Bacteria phyla
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