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Contents

   



(Top)
 


1 Features  





2 Versions  





3 See also  





4 References  





5 External links  














Geworkbench







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From Wikipedia, the free encyclopedia
 


geWorkbench
Developer(s)Columbia University,
First Genetic Trust
National Cancer Institute
Initial release2004; 20 years ago (2004)
Stable release

2.6.0.3 / December 21, 2016; 7 years ago (2016-12-21)

Operating systemWindows, Linux, Mac OS X
Platformx86
Available inEnglish
TypeGenome data analysis
LicenseBSD-like[1]
Websitewww.geworkbench.org

geWorkbench[2] (genomics Workbench) is an open-source software platform for integrated genomic data analysis. It is a desktop application written in the programming language Java. geWorkbench uses a component architecture. As of 2016, there are more than 70 plug-ins[3] available, providing for the visualization and analysis of gene expression, sequence, and structure data.

geWorkbench is the Bioinformatics platform of MAGNet,[4] the National Center for the Multi-scale Analysis of Genomic and Cellular Networks, one of the 8 National Centers for Biomedical Computing[5] funded through the NIH Roadmap (NIH Common Fund[6]). Many systems and structure biology tools developed by MAGNet investigators are available as geWorkbench plugins.

Features

[edit]

Demonstrations of each feature described can be found atGeWorkbench-web Tutorials.

Versions

[edit]

See also

[edit]

References

[edit]
  • ^ Floratos, A.; Smith, K.; Ji, Z.; Watkinson, J.; Califano, A. (2010). "GeWorkbench: An open source platform for integrative genomics". Bioinformatics. 26 (14): 1779–1780. doi:10.1093/bioinformatics/btq282. PMC 2894520. PMID 20511363.
  • ^ "Plugins - Workbench".
  • ^ MAGNet
  • ^ "Home". ncbcs.org.
  • ^ "NIH Roadmap - Research Teams of the Future". Archived from the original on 2013-06-21. Retrieved 2013-07-16.
  • ^ "Download and Installation - Workbench".
  • [edit]
    Retrieved from "https://en.wikipedia.org/w/index.php?title=Geworkbench&oldid=1193992110"

    Categories: 
    Bioinformatics software
    Software using the BSD license
    Cluster analysis
    Systems biology
    Protein structure
    Gene expression
    Hidden categories: 
    Articles with short description
    Short description is different from Wikidata
    Articles containing potentially dated statements from 2016
    All articles containing potentially dated statements
    Official website different in Wikidata and Wikipedia
     



    This page was last edited on 6 January 2024, at 17:31 (UTC).

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