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Contents

   



(Top)
 


1 Usage  





2 Background information  



2.1  Old-style and new-style IUCN urls  





2.2  Current IUCN citations  





2.3  Legacy issue with old-style urls  





2.4  New taxon IDs  
















Module:Cite IUCN






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Permanently protected module

From Wikipedia, the free encyclopedia
 


Usage

{{#invoke:Cite IUCN|cite}} – for {{cite IUCN}}

{{#invoke:Cite IUCN|make_cite_iucn}} – for {{make cite IUCN}}


Background information

Old-style and new-style IUCN urls

Until late 2018, the IUCN assessments used urls of form

http://www.iucnredlist.org/details/15955/0
where 15955 is the taxon ID and the “0” suffix indicates a global assessment (other single digit numbers code for various regional assessments).

From around September 2018, the IUCN switched to a new format for the url, of the form

https://www.iucnredlist.org/species/15955/50659951
where the 15955 is the taxon ID and a unique suffix identies a version of an assessment. This left all Wikipedia links to IUCN assesssments as dead links.

Shortly afterwards the IUCN produced a backup of the old system with links of the form

http://oldredlist.iucnredlist.org/details/15955/0
which uses an old-style url form on the oldredlist subdomain. Many citations were switched over to this url. However, this subdomain was shut down near the end of 2019, leaving many dead links generating 502 Bad Gateway errors.

Current IUCN citations

A typical IUCN citation, as given on their assessment pages, is now of the form:

Goodrich, J., Lynam, A., Miquelle, D., Wibisono, H., Kawanishi, K., Pattanavibool, A., Htun, S., Tempa, T., Karki, J., Jhala, Y. & Karanth, U. 2015. Panthera tigris. The IUCN Red List of Threatened Species 2015: e.T15955A50659951. https://dx.doi.org/10.2305/IUCN.UK.2015-2.RLTS.T15955A50659951.en. Downloaded on 19 December 2019.
where the electronic page number e.T15955A50659951 contains the taxon ID (between the T and A) and the assessment ID (after the A). These two identifying numbers are also contained in the doi.

When there is an amendment to an assessment, a new assessment number is assigned, which causes a change in the electronic page number and the url of the page.

The behaviour of the doi is unusual. A new assessment does not cause a new doi, it retains the original assessment number. If this is used by a template to construct a url, it will be to the original version of the assessment. However, if the url of the doi is followed, the IUCN doi resolver redirects to the latest assessment. The target of the doi has changed to the revised version of the IUCN assessment. Thus if the template uses the doi url the linked page will change from the one seen by the editor who added the citation.

Therefore this module will create a url with the following order of precedence:

  1. Use the electronic page number set by the |page= parameter to generate the url.
  2. Use the |id= to generate the url if it is of the two new-style two part form, i.e. TAXON_ID/ASSESSMENT_ID (e.g. 15955/50659951)
  3. Use the |doi= parameter to generate the url. This is last choice because it uses the number of the original assessment even when the assessment has been amended.

When none of the above options are available, and when |url= has the old form, this module will change the scheme from http://tohttps:// in an attempt to make a working link (see next section).

Legacy issue with old-style urls

There is still a legacy issue with old-style IUCN urls, which are still used in many Wikipedia citations.

Some months after the change to the new-style urls, the IUCN introduced redirects for the old-style urls that link to the appropriate pages addressed by the new style url. In most cases these redirects will work. So the oldstyle url for the tiger https://www.iucnredlist.org/details/15955/0 correctly links to the assessment at https://www.iucnredlist.org/species/15955/50659951 (see tiger).

However, not all assessments redirect. For instance, the oldstyle url for the Bengal mud eel http://www.iucnredlist.org/details/166410/0 links to the home page (see Bengal mud eel).

This failure of some old style url to be redirected is unexpected, as the redirect function of the IUCN API does link to the correct page. A url of the form

https://apiv3.iucnredlist.org/api/v3/taxonredirect/166410
will link to the correct page, even in cases where the automatic redirect faile, e.g. the Bengal mud eel.

However, redirects are not available when the taxon id has been replaced and an error in JSON format is returned (e.g. for house sparrow).

New taxon IDs

There is another case where the old style urls gives dead links, when the taxon ID has changed. For instance, the Italian sparrow was split off from the house sparrow as a new species and both assigned new taxon IDs. This left any old style urls to the original assessment as dead links.

In this case there is no action the template/module can take to resolve the issue. Active intervention of an editor is required.

require('strict');
local getArgs = require ('Module:Arguments').getArgs;

local amendment_pattern = '%s*%(amended version of (%d%d%d%d) assessment%)';
local errata_pattern = '%s*%(errata version published in (%d%d%d%d)%)';
local green_status_pattern = '%s*%((Green Status assessment)%)';


--[[--------------------------< I U C N _ I D E N T I F I E R S _ G E T >--------------------------------------

cs1|2 templates cite single sources;  when the identifiers in |doi=, |id=, and |page= are different from each other
then the template is attempting to cite multiple sources.  This function evaluates the identifier portions of these
parameters. returns seven values: identifyier parts (or nil when parameter not used) and a message (nil on success,
error message else)

the identifier portions of the several parameters must be properly formed

]]

local function iucn_identifiers_get (args)
 local doi_taxon_ID, doi_assesment_ID
 local page_taxon_ID, page_assesment_ID
 local url_taxon_ID, url_assesment_ID
 local msg

 if args.doi then
  local lang_tag
  doi_taxon_ID, doi_assesment_ID, lang_tag = args.doi:match ('[Tt](%d+)[Aa](%d+)%.(%l%l)$')
  if not doi_taxon_ID or not ({['en'] = true, ['es'] = true, ['fr'] = true, ['pt'] = true})[lang_tag] then
   msg = 'malformed |doi= identifier'
  end
 end
 if args.page then
  page_taxon_ID, page_assesment_ID = args.page:match ('^[eE]%.[Tt](%d+)[Aa](%d+)$')
  if not page_taxon_ID then
   msg = 'malformed |page= identifier'
  end
 end
 if args.url then
  if args.url:match ('https://www.iucnredlist.org/species/') then   -- must be a 'new-form' url
   url_taxon_ID, url_assesment_ID = args.url:match ('/species/(%d+)/(%d+)')
   if not url_taxon_ID then
    msg = 'malformed |url= identifier'
   end
  end
 end

 if not msg then
  if doi_taxon_ID and page_taxon_ID then
   if (doi_taxon_ID ~= page_taxon_ID or ((doi_assesment_ID ~= page_assesment_ID) and not args.errata)) then
    msg = '|doi= / |page= mismatch'
   end
  end
  if doi_taxon_ID and url_taxon_ID then
   if (doi_taxon_ID ~= url_taxon_ID or ((doi_assesment_ID ~= url_assesment_ID) and not args.errata)) then
    msg = '|doi= / |url= mismatch'
   end
  end
  
  if page_taxon_ID and url_taxon_ID then
   if (page_taxon_ID ~= url_taxon_ID or ((page_assesment_ID ~= url_assesment_ID) and not args.errata)) then
    msg = '|page= / |url= mismatch'
   end
  end
 end

 if msg then
  msg = '<span class="error" style="font-size:100%">{{cite iucn}}: error: ' .. msg .. ' ([[Template:Cite iucn|help]])</span>'
 end
 
 return doi_taxon_ID, doi_assesment_ID, page_taxon_ID, page_assesment_ID, msg
end


--[[--------------------------< I U C N _ V O L U M E _ C H E C K >--------------------------------------------

compares volume in |volume= (if present) against year in |date= or |year= (if present) against volume in |doi= (if present)

returns nil if all that are present are correct; message else

]]

local function iucn_volume_check (args)
 local vol = args.volume;
 local date = args.date or args.year;
 local doi = args.doi and args.doi:match ('[Ii][Uu][Cc][Nn]%.[Uu][Kk]%.(%d%d%d%d)')
 local msg
 
 if vol and date then
  msg = (vol ~= date) and '|volume= / |date= mismatch' or msg
 end
 if vol and doi then
  msg = ((vol ~= doi) and not args.amends) and '|volume= / |doi= mismatch' or msg
 end
 if date and doi then
  msg = ((doi ~= date) and not args.amends) and '|date= / |doi= mismatch' or msg
 end
 
 return msg
end


--[[--------------------------< C I T E >----------------------------------------------------------------------

Wraps {{cite journal}}:
     takes cite journal parameters but updates old style url using electronic page number
     page should be in format e.T13922A45199653
     the url uses                13922/45199653
     so we need to extract the number between T and A (taxon ID) and the number after A (assessment ID)
     the target url is https://www.iucnredlist.org/species/13922/45199653
     usage: {{#invoke:iucn|cite}}
     template: {{Template:Cite iucn}}

]]

local function cite (frame)
 local error_msgs = {};              -- holds error messages for rendering
 local maint_msgs = {};              -- holds hidden maint messages for rendering
 local namespace = mw.title.getCurrentTitle().namespace;      -- used for categorization
 local args = getArgs (frame);            -- local copy of template arguments

 local missing_title = not args.title          -- special case that results from script writing {{cite iucn}} template from bare iucn url
                    -- don't duplicate cs1|2 error message; don't duplicate {{cite iucn}} error cat
                    -- TODO: remove this when the error category has been cleared of missing title errors

 if args.title and (args.title:match (errata_pattern) or args.title:match (amendment_pattern)) then
  table.insert (maint_msgs, 'title has extraneous text');     -- announce that this template has has errata or amendment text
 end

 local doi_taxon_ID, doi_assesment_ID          -- all of these contain the same identifying info in slightly
 local page_taxon_ID, page_assesment_ID          -- different forms. when any combination of these is present,
 local msg                 -- this holds error messages; nil on success

 doi_taxon_ID, doi_assesment_ID, page_taxon_ID, page_assesment_ID, msg = iucn_identifiers_get (args);
 if msg then
  table.insert (error_msgs, msg);           -- malformed or mismatched identifiers
 end
 args.id = nil                -- unset; not supported

 local url_taxon_ID = page_taxon_ID or doi_taxon_ID;       -- select for use in url that we will create
 local url_assesment_ID = page_assesment_ID  or doi_assesment_ID
 
 local url = args.url
 if url then
  if url:find ('iucnredlist.org/details/', 1, true) then     -- old-form url
   if url_taxon_ID then            -- when there is an identifier
    url = nil              -- unset; we'll create new url below
   else                -- here when old-form but no identifier that we can use to create new url
    args.url = args.url:gsub ("http:", "https:")     -- sometimes works with redirect on iucn site
   end
   table.insert (maint_msgs, 'old-form url')       -- announce that this template has has an old-form url
  elseif url:find ('iucnredlist.org/species/', 1, true) then    -- new-form url
--   table.insert (maint_msgs, 'new-form url')    --TODO: restore this line when most new-form urls have been removed from article space  -- announce that this template has has an new-form url
  else
   table.insert (maint_msgs, 'unknown url')       -- announce that this template has has some sort of url we don't recognize
  end
 end

 if not url then                -- when no url or unset old-form url
  if url_taxon_ID then
   args.url = "https://www.iucnredlist.org/species/" .. url_taxon_ID .. '/' .. url_assesment_ID
  else
   table.insert (maint_msgs, 'no identifier')       -- TODO: raise this to  error status?
  end
 end

 -- add journal if not provided (TODO decide if this should override provided value)
 if not args['journal'] and not args['work'] then
  args['journal'] = "[[IUCN Red List|IUCN Red List of Threatened Species]]"
 end
 
 msg = iucn_volume_check (args);            -- |volume=, |year= (|date=), |doi= must all refer to the same volume
 if msg then
  table.insert (maint_msgs, msg);
 end

 if not args.volume and (args.year or args.date) then
  args.volume = args.year or args.date
 end
 
 if args.errata then
  args['orig-date'] = 'errata version of ' .. (args.year or args.date or args.volume) .. ' assessment';
  args.date = args.errata;            -- update publication data to errata year
  args.year = nil;              -- unset these as no longer needed
  args.errata = nil;
 elseif args.amends then
  args['orig-date'] = 'amended version of ' .. args.amends .. ' assessment';
  args.amends = nil;              -- unset as no longer needed
 end
                    -- add free-to-read icon to mark a correctly formed doi
 args['doi-access'] = args.doi and args.doi:match ('10%.2305/[Ii][Uu][Cc][Nn].+[Tt]%d+[Aa]%d+%.%a%a') and 'free' or nil
  
 return frame:expandTemplate{ title = 'cite journal', args = args } ..       -- the template
  (((0 == #error_msgs) and missing_title) and ('[[Category:cite IUCN errors]]') or '') ..  -- special case to not duplicate cs1|2 err msg or cite iucn error cat
  ((0 < #error_msgs) and table.concat (error_msgs, ', ') or '') ..       -- the error messages
  (((0 < #error_msgs) and (0 == namespace)) and ('[[Category:cite IUCN errors]]') or '') .. -- error category when in mainspace
  ((0 < #maint_msgs) and ('<span class="citation-comment" style="display: none; color: #33aa33; margin-left: 0.3em;">' .. table.concat (maint_msgs, ', ') .. '</span>') or '') .. -- the maint messages
  (((0 < #maint_msgs) and (0 == namespace)) and ('[[Category:cite IUCN maint]]') or '') .. -- maint category when in mainspace
  (((not args['doi-access']) and (0 == namespace)) and '[[Category:cite IUCN without doi]]' or ''); -- properties cat for {{cite IUCN}} that does not have |doi=
end


--[=[-------------------------< E T _ A L _ P A T T E R N S >--------------------------------------------------

This adapted from Module:Citation/CS1/Configuration

This table provides Lua patterns for the phrase "et al" and variants in a name.

]=]

local et_al_patterns = {
 "[;,]? *[\"']*%f[%a][Ee][Tt]%.? *[Aa][Ll][%.;,\"']*$",      -- variations on the 'et al' theme
 "[;,]? *[\"']*%f[%a][Ee][Tt]%.? *[Aa][Ll][Ii][AaIi][Ee]?[%.;,\"']*$",  -- variations on the 'et alia', 'et alii' and 'et aliae' themes (false positive 'et aliie' unlikely to match)
 "[;,]? *%f[%a]and [Oo]thers",            -- an alternative to et al.
 }


--[[---------------------< N A M E _ H A S _ E T A L >--------------------------

This adapted from Module:Citation/CS1

Evaluates the content of a name for variations on the theme of et al.  If found,
returns true; nil else

]]

local function name_has_etal (name)
 local etal;

 if name then                -- name can be nil in which case just return
  name = name:gsub ('%b<>', '');           -- remove any html markup (typically <i>...</i>)
  for _, pattern in ipairs (et_al_patterns) do       -- loop through all of the patterns
   if name:match (pattern) then          -- if this 'et al' pattern is found in name
    return true;             -- has etal, so return true
   end
  end
 end
end


--[[--------------------------< A U T H O R _ L I S T _ M A K E >----------------------------------------------

creates a list of individual |authorn= parameters from the list of names provided in the raw iucn citation.  names
must have the form: Surname, I. (more than one 'I.' pair allowed but no spaces between I. pairs)

assumes that parenthetical text at the end of the author-name-list is a collaboration
 Name, I.I., & Name, I.I. (Colaboration name)

assumes that <i>et al.</i> is the last name in a list of names

]]

--local function author_names_get (raw_iucn_cite)
local function author_names_get (raw_iucn_cite, params_t)      -- EXPERIMENT
 local list = {};               -- table that holds name list parts
 local author_names = raw_iucn_cite:match ('^([^%d]-)%s+%d%d%d%d');   -- extract author name-list from raw iucn citation
 local collaboration = author_names:match ('%s*(%b())$');     -- get collaboration name if it exists

 if collaboration then              -- when there is a colaboration
  collaboration = collaboration:gsub ('[%(%)]', '');      -- remove bounding parentheses
  author_names = author_names:gsub ('%s*(%b())$', '');     -- and remove collaboration from author-name-list
 end
 
 local names = author_names:gsub ('%.?,?%s+&%s+', '.|');      -- replace 'separators' (<optional dot><optional comma><space><ampersand><space>) with <dot><pipe>
 names = names:gsub ('%.,%s*', '.|');          -- replace 'separators' (<dot><comma><optional space>) with <dot><pipe>
 names = names:gsub ('(%.%u),', '%1.|');          -- special case for when last initial is missing its trailing dot
 list = mw.text.split (names, '|');           -- split the string on the pipes into entries in list{}
 
 if 0 == #list then
  params_t['author'] = author_names;          -- EXPERIMENT
  return table.concat ({'|author=', author_names}), params_t;    -- EXPERIMENT  -- no 'names' of the proper form; return the original as a single |author= parameter
--  return table.concat ({'|author=', author_names})      -- no 'names' of the proper form; return the original as a single |author= parameter
 else
  for i, name in ipairs (list) do           -- spin through the list and 
   if name_has_etal (name) then          -- if this name has some form of 'et al'
    params_t['display-authors'] = 'etal';       -- EXPERIMENT
    list[i] = '|display-authors=etal';        -- add |dispaly-authors=etal parameter and 
    break;               -- assume that the etal was the last 'name' so stop processing names
   else
    params_t['author' .. i] = name;         -- EXPERIMENT
    list[i] = table.concat ({'|author', (i == 1) and '' or i, '=', name}); -- add |authorn= parameter names; create |author= instead of |author1=
   end
  end
  if collaboration then
   params_t['collaboration'] = collaboration;       -- EXPERIMENT
   table.insert (list, table.concat ({'|collaboration', '=', collaboration})); -- add |collaboration= parameter
  end
  return table.concat (list, ' ');          -- make a big string and return that
 end
end


--[[--------------------------< T I T L E _ G E T >------------------------------------------------------------

extract and format citation title; attempts to get the italic right

''binomen'' (amended or errata title)
''binomen''
''binomen'' ssp. ''subspecies''
''binomen'' subsp. ''subspecies''
''binomen'' var. ''variety''
''binomen'' subvar. ''subvariety''

all of the above may have trailing amended or errata text in parentheses

TODO: are there others?

]]

local function title_get (raw_iucn_cite)
 local title = raw_iucn_cite:match ('%d%d%d%d%.%s+(.-)%s*%. The IUCN Red List of Threatened Species');

 local patterns = {               -- tables of string.match patterns [1] and string.gsub patterns [2]
  {'(.-)%sssp%.%s+(.-)%s(%b())$', "''%1'' ssp. ''%2'' %3"},    -- binomen ssp. subspecies (zoology) with errata or amended text
  {'(.-)%sssp%.%s+(.+)', "''%1'' ssp. ''%2''"},       -- binomen ssp. subspecies (zoology)
  {'(.-)%ssubsp%.%s+(.-)%s(%b())$', "''%1'' subsp. ''%2'' %3"},   -- binomen subsp. subspecies (botany) with errata or amended text
  {'(.-)%ssubsp%.%s+(.+)', "''%1'' subsp. ''%2''"},      -- binomen subsp. subspecies (botany)
  {'(.-)%svar%.%s+(.-)%s+(%b())$', "''%1'' var. ''%2'' %3"},    -- binomen var. variety (botany) with errata or amended text
  {'(.-)%svar%.%s+(.+)', "''%1'' var. ''%2''"},       -- binomen var. variety (botany)
  {'(.-)%ssubvar%.%s+(.-)%s(%b())$', "''%1'' subvar. ''%2'' %3"},   -- binomen subvar. subvariety (botany) with errata or amended text
  {'(.-)%ssubvar%.%s+(.+)', "''%1'' subvar. ''%2''"},      -- binomen subvar. subvariety (botany)
  {'(.-)%s*(%b())$', "''%1'' %2"},          -- binomen with errata or amended text
  {'(.+)', "''%1''"},              -- binomen
  }
 
 for i, v in ipairs (patterns) do           -- spin through the patterns
  if title:match (v[1]) then            -- when a match
   title = title:gsub (v[1], v[2]);         -- add italics 
   break;                -- and done
  end
 end

-- return table.concat ({' |title=', title});         -- return the |title= parameter
 return title;                -- return the formatted title
end


--[[--------------------------< M A K E _ C I T E _ I U C N >--------------------------------------------------

parses apart an iucn-format citation copied from their webpage and reformats that into a {{cite iucn}} template for substing

automatic substing by User:AnomieBOT/docs/TemplateSubster

]]

local function make_cite_iucn (frame)
 local args_t = getArgs (frame);
 local raw_iucn_cite = args_t[1];

 local template_t = {'{{cite iucn '};          -- sequence that holds the {{cite iucn}} template as it is being assembled; for nowiki'd output
 local params_t = {};              -- table of parameter/value pairs for substing
 
 local year, volume, page, doi, accessdate;

 year = raw_iucn_cite:match ('^%D+(%d%d%d%d)');
 volume, page = raw_iucn_cite:match ('(%d%d%d%d):%s+(e%.T%d+A+%d+)%.%s?');
 doi = raw_iucn_cite:match ('10%.2305/IUCN%.UK%.[%d%-]+%.RLTS%.T%d+A%d+%.%a%a');

 accessdate = raw_iucn_cite:match ('Accessed on (.-)%.?$') or raw_iucn_cite:match ('Downloaded on (.-)%.?$'); -- 'Downloaded' → 'Accessed' change occured December 2021;
 accessdate = accessdate:gsub ('^0', '');         -- strips leading 0 in day 01 January 2020 -> 1 January 2020

 table.insert (template_t, author_names_get (raw_iucn_cite, params_t));  -- add author name parameters; as a single string to <template_t>; as individual entries to <params_t>

 table.insert (template_t, table.concat ({' |year=', year}));    -- add formatted year
 params_t.year = year;
 
 local title = title_get (raw_iucn_cite);
 local type_p = title:match (green_status_pattern);
 if type_p then
  title = title:match ('^([^%(]+)%s*%(');
  table.insert (template_t, table.concat ({' |type=', type_p}));   -- add formatted errata
  params_t.type = type_p;
 end

 local errata = title:match (errata_pattern);        -- nil unless IUCN citation has errata annotation; else year that this errata published (|date=)
 if errata then
  table.insert (template_t, table.concat ({' |errata=', errata}));  -- add formatted errata
  params_t.errata = errata;
  title = title:gsub (errata_pattern, '');        -- remove errata annotation
 end
 local amends = title:match (amendment_pattern);        -- nil unless IUCN citation has amendment annotation; else year that this assessment amends (|orig-date=)
 if amends then
  table.insert (template_t, table.concat ({' |amends=', amends}));  -- add year of assessment that this assessment amends
  params_t.amends = amends;
  title = title:gsub (amendment_pattern, '');        -- remove amendment annotation
 end

 table.insert (template_t, table.concat ({' |title=', title}));    -- add formatted title
 params_t.title = title;
 table.insert (template_t, table.concat ({' |volume=', volume}));   -- add formatted volume
 params_t.volume = volume;
 table.insert (template_t, table.concat ({' |page=', page}));    -- add formatted page
 params_t.page = page;
 table.insert (template_t, table.concat ({' |doi=', doi}));     -- add formatted doi
 params_t.doi = doi;

 table.insert (template_t, table.concat ({' |access-date=', accessdate})); -- add formatted access-date
 params_t['access-date'] = accessdate;

 table.insert (template_t, '}}');           -- close the template

 if args_t[2] then               -- if anything in args_t[2], write a nowiki'd version that editors can copy into <ref> tags
  return frame:preprocess (table.concat ({'<syntaxhighlight lang="wikitext" inline="1">', table.concat (template_t), '</syntaxhighlight>'})); -- caveat lector: if left long enough anomiebot will subst this
 end

 if args_t['ref'] then              -- enable subst of ref tags with name
  return frame:preprocess ('<ref name=' .. args_t['ref'] .. '>' .. table.concat (template_t) .. '</ref>')
 end

 return frame:preprocess (table.concat (template_t));      -- render {{cite iucn}} template; substable
end


--[[--------------------------< E X P O R T E D   F U N C T I O N S >------------------------------------------
]]

return {
 cite = cite,
 make_cite_iucn = make_cite_iucn,
 }

Retrieved from "https://en.wikipedia.org/w/index.php?title=Module:Cite_IUCN&oldid=1231859193"

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This page was last edited on 30 June 2024, at 17:15 (UTC).

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