Vukušić transitioned into a head coach in 1963 to manage Lokomotiva Vinkovci.[1] In 1982, he returned to his former club Dinamo Vinkovci as head coach in the Yugoslav Second League, and secured promotion to the Yugoslav First League by winning the West Division title.[2] He remained with Vinkovci until the 1985 season and managed FK Vojvodina in 1986 where he secured promotion for the club to the top tier by winning the league.[3] In 1989, he served as the head coach for Toronto Croatia in the National Soccer League.[4] In late 1989, he was named the head coach for NK Osijek in the Yugoslav First League.[5]
In 1991, he returned to manage Dinamo Vinkovci in the Yugoslav Second League.[6] In 1995, he managed in the Croatian First Football League with NK Mladost 127 for two seasons, and returned in the 1998-99 season.[7] In 1997, he returned to former team Dinamo Vinkovci later changed to HNK Cibalia in the Croatian Second Football League. In 1999, he managed in the Croatian Third Football League with NK Kamen Ingrad and secured the league title and promotion to the Croatian Second League.[8][9] He later became the president of the association of coaches for the Croatian First Football League.[10]
^Da Costa, Norman (August 8, 1989). "A sports tale to warm your heart An athlete's dream comes true with aid of transplanted ticker". Toronto Star. p. B7.